VMD-L Mailing List

From: Bharat Sharma (bharatsolbridge_at_gmail.com)
Date: Sat Jun 10 2017 - 09:48:06 CDT

Hello,
I have a file in XYZ format (ATOM X Y Z). I want to load on VMD to do some
calculations using tcl script. This is not a structure file, I want to load
into vmd so that I can use my previously written script to do some
calculations.

It is understood why vmd refused to load vmd saying "molecule_structure:
severe error indicated by plugin aborting loading of molecule" as
coordinates do not make sense. But I still want to load them.

I have tried to use "filebond off autobond off". It did not help me.

Is there any way, I can simply load a file ignoring all the errors?

I appreciate any suggestions.

Thank you.

Bharat