VMD-L Mailing List

From: Anjela Manandhar (anjelamanandhar_at_gmail.com)
Date: Mon Aug 15 2016 - 09:45:56 CDT

Hello Nuno,
Thank you very much for your response. I have attached my .vmdrc file. Also
I realized when loading VMD, at the end it states "The VsLab package could
not be loaded" , however I see VsLab plugin in VMD. Thank you.

Sincerely,
Anjela Manandhar
Graduate Student
Biochemistry Program
Graduate Center, City University of New York
365 Fifth Avenue, NY-10016, USA

On Fri, Aug 12, 2016 at 4:25 PM, Nuno Sousa Cerqueira <nscerque_at_fc.up.pt>
wrote:

> Hello anjela,
>
> Can you send me your .vmdrc file.
> There is not enough details about the error.
> Can you send me the output of the vmd terminal.
>
> Regards,
>
> Nuno Sousa Cerqueira
>
>
> On Thursday, August 11, 2016, John Stone <johns_at_ks.uiuc.edu> wrote:
>
>> Hi,
>> The 'vslab' plugin authors would be the best people to contact
>> initially. Without knowing whether the crash occurs within VMD itself
>> or in their compiled plugin code and/or during what particular operation,
>> I can't really say much about that fault you're experiencing. If you can
>> tell the 'vslab' authors about the problem and get them to help you track
>> down where the issue occurs then the three of us could probably resolve
>> the issue.
>>
>> Cheers,
>> John Stone
>> vmd_at_ks.uiuc.edu
>>
>> On Thu, Aug 11, 2016 at 11:56:54AM -0400, Anjela Manandhar wrote:
>> > I am trying to use vslab plugin in vmd. When I try to run the
>> calculation,
>> > vmd crashes with the error
>> > Error in `/usr/local/lib/vmd/vmd_LINUXAMD64': corrupted
>> double-linked
>> > list: 0x0000000003574c60 ***
>> > I am not sure what the error is about. How can I solve this? Thank
>> you.
>> >
>> > Sincerely,
>> > Anjela Manandhar
>>
>> --
>> NIH Center for Macromolecular Modeling and Bioinformatics
>> Beckman Institute for Advanced Science and Technology
>> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
>> http://www.ks.uiuc.edu/~johns/ Phone: 217-244-3349
>> http://www.ks.uiuc.edu/Research/vmd/
>>
>>
>
> --
> Nuno M. F. Sousa A. Cerqueira
> Chemistry Department
> Faculty of Sciences
> University of Porto
> Rua do Campo Alegre, s/n
> 4169-007 Porto
> Portugal
> Tel: +351 220402501
> Fax: +351 220 402 009
> email: nscerque_at_fc.up.pt
> website: http://www.fc.up.pt/pessoas/nscerque
>
>


  • application/octet-stream attachment: .vmdrc