VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Jan 13 2016 - 13:38:27 CST

Hi,
  At present, the implementation of the 'volN' and 'interpvolN'
selection keywords is based on hard-coded strings because the atom selection
language doesn't implement the concept of array indices for the
volumetric data yet. It is easy to extend the number of volumes that
can be selected by something on the order of 2x with trivial changes
to the code. If you're intending to work with a much larger number
of volumetric data objects (say 50 or 100), then that might not be
very useful, but if you just need something on the order of 10, that
is easy for me to add quickly. Let me know what you're doing and I'll
see if I can give you at least some kind of short-term solution that's
easy to use for the time being.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Wed, Jan 13, 2016 at 03:33:13PM +0100, Daniel Möller wrote:
> Hi,
>
>
>
> I have some questions for an analyse purpose with a script:
>
> Is there a way to read more than 8 volumes via atomselect (volN or
> interpolvolN
>
> (http://www.ks.uiuc.edu/Research/vmd/current/ug/node90.html)) from one
> molecule?
>
> I can load more than 8 volumes in a molecule and use them as
> representations, but couldn't read them all.
>
>
>
> If this is not working:
>
> How can I remove volume files from molecules?
>
>
>
> I found some old mails with same questions, and that it's on the TODO:
>
> http://www.ks.uiuc.edu/Research/vmd/mailing_list/vmd-l/8893.html
>
> http://www.ks.uiuc.edu/Research/vmd/mailing_list/vmd-l/12692.html
>
> http://www.ks.uiuc.edu/Research/vmd/mailing_list/vmd-l/13891.html
>
>
>
> Thanks for your help.
>
>
>
> Sincerely
>
>
>
> Daniel Moeller
>
>
>
> --
>
> ------------------------
>
> Dipl. Biochem. Daniel Moeller
>
>
>
> Biophysical Chemistry
>
> Institut of Biochemistry
>
> Unversity of Greifswald
>
> Felix-Hausdorff-Strasse 4
>
> 17489 Greifswald - Germany
>
>
>
> Tel +49 3834 86 4406
>
>
>
> http://www.mnf.uni-greifswald.de/institute/institut-fuer-biochemie/biophysikalische-chemie.html
>
>
>
> 

-- 
NIH Center for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
http://www.ks.uiuc.edu/~johns/           Phone: 217-244-3349
http://www.ks.uiuc.edu/Research/vmd/