VMD-L Mailing List

From: Roberto Gaspari (roby.gaspari_at_gmail.com)
Date: Wed Nov 07 2012 - 02:05:11 CST

Dear all

I recently tried to load a trr gromacs trajectory with vmd.
Vmd exits with a message of segmentation fault.

This does not always happen. I tried for example to open another trr file
produced by gromacs on another machine and it went all right.

After running vmd with the debug option I received the following
message upon stopping:

 0xf7a39d16 in memcpy () from /lib/libc.so.6

or

 0x00007ffff5fad090 in _wordcopy_fwd_aligned () from /lib64/libc.so.6

If I try to load on another machine.
So it seems there's a problem in handling those libraries.

Any help would be much appreciated.
Thanks a lot

Roberto