VMD-L Mailing List

From: ngpntm_at_gmail.com
Date: Wed Oct 24 2012 - 05:44:33 CDT

Hi All,

I would like to analyse the secondary structures formed by a protein in a
set of trajectories using STRIDE. I know how to do it by hand (Extensions
-> Analysis -> Timeline. Then, Calculate -> Calc. Sec. Struct. And then
saving it by File -> write data file).

My question is, is there a way to do all these automatically using a script
(sscache.tcl?) ?

best regards,
NT