VMD-L Mailing List
From: Mahendra B Thapa (thapamb_at_mail.uc.edu)
Date: Mon Jul 02 2012 - 11:56:43 CDT
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Dear VMD users,
I generated amber mdcrd file using amber 12
with the amber force field. To view the structure, I at first loaded *prmtop
file* with "file type - AMBER7 Parm" and then loaded *mdcrd file* with "
file type - Amber coordinates with periodic box". Unfortunately, VMD did
not produce image instead just a line like image. Interestingly when I
used the *pdb- format *, it worked fine. The question is: why VMD looks
like not supporting prmtop and mdcrd files.
Thanks,
Mahendra Thapa
University of Cincinnati
- Next message: Axel Kohlmeyer: "Re: difficulty in viewing AMBER mdcrd files"
- Previous message: Axel Kohlmeyer: "Re: VMD selection: change atom size across various frames"
- Next in thread: Axel Kohlmeyer: "Re: difficulty in viewing AMBER mdcrd files"
- Reply: Axel Kohlmeyer: "Re: difficulty in viewing AMBER mdcrd files"
- Reply: John Stone: "Re: difficulty in viewing AMBER mdcrd files"
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