VMD-L Mailing List

From: ½¹±ª (baogenuli_at_gmail.com)
Date: Fri Jun 03 2011 - 21:27:17 CDT

hello everybody:
         I am new to VMD and NAMD , they are very useful for me . now I want
to make a Coarse Grained DNA model for simulation . I had my bead database
definitions followed by
http://www.ks.uiuc.edu/Research/vmd/plugins/cgtools/

but I don't kown how to create my force field file and topology file from
all atom files .

    Is there any rule or methods for me to follow ? thanks very much for
your help .

best wishes