VMD-L Mailing List

From: Perreault, Roger Edward (rperreau_at_middlebury.edu)
Date: Wed Oct 22 2008 - 20:34:57 CDT

Hello VMD Users,

I am attempting to align an imported FASTA sequence with several sequences from PDBs I also have loaded into Multiseq. I run a STAMP alignment with the default settings and the error message

'can't read 'SequenceIDtoMolID(122)': no such element in array'

appears, though the numerical argument changes each time. Does this mean that there is a problem with my sequence? The problem does not occur if I attempt to align two of the template sequences.

--Roger P.

Middlebury, Vermont, USA