VMD-L Mailing List

From: Stern, Julie (jvstern_at_bnl.gov)
Date: Thu May 24 2007 - 21:15:31 CDT

Hello,
    I've built a non-standard residue and I'm having troubling viewing it with vmd. It won't show
up as connected to the standard residues at all. The tube representation doesn't show anything.
The sequence viewer doesn't show that the residue is there. In fact, I can only view it by asking
for it by residue number the CPK view, but its also not connected to the neighboring residue.
    So, I'm wondering if I didn't make the standard residue correctly, OR does anyone know how
vmd typically handles these?
 
Thanks.
 
--Julie