VMD-L Mailing List

From: syma (syma.khalid_at_bioch.ox.ac.uk)
Date: Tue Mar 27 2007 - 16:18:57 CDT

Hi,

Please can someone help.

I am trying to use the RDF GUI in vmd 1.8.5 (windows and linux).
I want to calculate the RDF of two types of lipids around another species in
my system. There are 119 lipid molecules of one type and 116 of the other.
Do I need to do some sort of normalisation before I can compare the RDFs, or
indeed is it possible to compare RDFs in this way?

Many thanks for your help,

-Syma

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Dr Syma Khalid
Department of Biochemistry,
University of Oxford
South Parks Road,
Oxford
OX1 3QU
U.K.

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