VMD-L Mailing List

From: Akshay Patny (akshay17_at_olemiss.edu)
Date: Wed Jan 24 2007 - 10:47:00 CST

Hi All

I want to place my system in a periodic box using TLEAP in AMBER using
"set box" command to later run a PBC NPT MD simulation.

For that I need to calculate the XYZ dimensions of my system, can
somebody tell me how can we calculate X, Y and Z dimensions of current
system loaded in VMD. I have the TOP and CRD files.

Thanks, I look forward to hear from you.

Best Regards
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Akshay Patny
PhD Candidate (5th Yr.), Computational Chemistry
Department of Medicinal Chemistry, School of Pharmacy
The University of Mississippi
805 College Hill Rd, # 9, Oxford, MS 38655
E-mail: akshay17_at_olemiss.edu
Phone (O): (662)-915-1286,(M): (662)-801-5496
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