VMD-L Mailing List

From: gcmc jie (gcmc.gcmd_at_gmail.com)
Date: Thu Nov 30 2006 - 13:41:10 CST

Hi all,

I want to indicate the hydrophobic contacts at the interface between two
domains. hydrophobic contact is defined when the center of mass of distance
between two hydrophobic side chains is less than 4 Å. I would like to draw
lines to show these hydrophobic contacts.

Since I am new to use VMD, I google and search vmd-mail-list, I could not
find similar script?
anybody can give me hint. thanks in advance.

Jay