From: Justin Gullingsrud (
Date: Fri Sep 08 2006 - 14:50:35 CDT


That's a very good suggestion... If I get a chance I'll see if it
might be possible to draw the plots using different colors for each
molecule. For now, though, the only workaround I can think of is to
do what John suggested and produce the graph yourself using the
phi/psi values that VMD calculates, or else produce two separate Rama
plots using your two molecules, create Postscript output, then import
that postscript into a program like Adobe Illustrator and manually
convert the colors.


On 9/8/06, Rathinavelan, Thenmalarchelvi <> wrote:
> Hi,
> I like to get the Ramachandran plot of 2 pdb files in same graph, viz. superposing two ramachandran plots. Can you please tell me whether it is possible to do it using VMD.
> Thank you,
> Thenmalar

    I speak of certain afternoons in early fall, waterfalls of
immaterial gold, the transformation of the world, when everything
loses its body, everything is held in suspense,
    and the light thinks, and each one of us feels himself thought by
that reflective light, and for one long moment time dissolves, we are
air once more...
                      -- Octavio Paz, "I speak of the city"