VMD-L Mailing List

From: Harindar Keer (hkeer_at_uci.edu)
Date: Thu Mar 30 2006 - 16:37:49 CST

Hi,

 I am trying to write a script describe biological system in VMD. I am
trying to do something as following
i) Load molecule in CPK representation
ii) rotate it by 360
ii) And then change representation to VDW after waiting for sometime
and then to NewCartoon representation.

The issue is all I get to see is NewCartoon representation roataing at
the end, I tried wait and also waitfor, suggested by John on mailing
list, it seems to stop the rotation and again start after time.

 I used "play" to load following script

mol new {./Desktop/1LGH_A.pdb} type pdb
mol delrep 0 top
mol representation Tube 0.4 6
mol color Name

mol selection {protein}
mol material Opaque
mol addrep top
mol rename top {dimer_LGH.pdb}
rotate y by 360 5
wait 10
mol delrep 0 top
mol representation CPK 1.4 0.5 8 8
mol color Name
mol selection {protein}
mol addrep top

Many thanks,
Harindar