VMD-L Mailing List

From: Eduard Schreiner (eduard.schreiner_at_theochem.ruhr-uni-bochum.de)
Date: Thu Oct 06 2005 - 06:18:01 CDT

Anna Karawajczyk wrote:
> Hi,
>
> I have discovered how to move the molecule changing it coordinates,
> but I still do not know how to save these two molecules as an one pdb file...
>
> Do you have any suggestion?
> Thank you,
> Anna
>
Hey Anna,
Might be that is too complicated, but it works:

Normally, if you loaded two pdb files, you only will be able to save
them separatly. But you could save them each as xyz file, concatenate
these and change the number of atoms in that file accordingly. If you
lad this file in vmd both structures are in one vmd-molecule. Then you
can convert it to whatever format you want with vmd.

Eddi 

-- 
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Eduard Schreiner                        e-mail: eduard.schreiner_at_rub.de
Lehrstuhl fuer Theoretische Chemie          Phone: ++49 (0)234/32-22121
Ruhr-Universitaet Bochum - NC 03/52         Fax:   ++49 (0)234/32-14045
D-44780 Bochum                               http://www.theochem.rub.de
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