VMD-L Mailing List
From: Cetin Baloglu (baloglu_at_gmail.com)
Date: Wed May 18 2005 - 03:44:34 CDT
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Hi,
I use periodic boundary conditions in my simulations and during the
simulations, the side chains are moving out of the box as expected.
However I want to make sure when a big conformational change occurs
the water interacts with residues that are buried previously. Is
there a trick to see residues moving out of the box, with the expected
water.
Cetin Baloglu
- Next message: IBC strbio: "ied.py : tk.h version (8.3) doesn't match libtk.a version (8.4)"
- Previous message: Sabuj Pattanayek: "Re: Re: fglrx driver workaround?"
- Next in thread: John Stone: "Re: Hydration"
- Reply: John Stone: "Re: Hydration"
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