VMD-L Mailing List

From: Charles Moad (cmoad_at_indiana.edu)
Date: Wed May 11 2005 - 21:38:14 CDT

        I am trying to use autoimd to start a simulation of trimethoprim
interacting with a protein. The pdb file can be seen here:
http://xray.bmc.uu.se/hicup/TOP/top_msd.txt

        Can I alias "TOP" to another known residue? If not, is there an easy
way to create a charmm param for it?

Thanks,
        Charlie