VMD-L Mailing List
From: Wen Li (liw_at_wadsworth.org)
Date: Fri Apr 01 2005 - 11:15:08 CST
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Hello Everyone,
I am wondering if there is a User's guide for RMSDTT in vmd - I am trying
to align an MD trajectory to a reference structure which is not in the
trajectory.
>From the window of RMSD trajectory Tool, it seems to me like that the
reference structure comes from a frame of the trajectory. If my reference
is not in the trajectory, how I can make it? My trajectory file was
generated from AMBER.
I appreciate any help.
Wen
- Next message: gtg991m_at_mail.gatech.edu: "superimpose RNA backbones"
- Previous message: Axel Kohlmeyer: "Re: about adding ions to an ion channel pore"
- In reply to: John Stone: "Re: conformational alignment"
- Next in thread: Luis Gracia: "Re: rmsdtt"
- Reply: Luis Gracia: "Re: rmsdtt"
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