VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Mon Jan 24 2005 - 17:26:08 CST

Hi,
  VMD can read a few file formats that relate to GRASP, but it would
be helpful to know what data you're actually trying to view. If you
want to load a surface calculated by GRASP, then VMD can load GRASP
polygonal surface files:
  http://www.ks.uiuc.edu/Research/vmd/plugins/molfile/graspplugin.html

If you want to read potential maps into VMD, then you probably want to use
the formatted or unformatted phimap readers:
  http://www.ks.uiuc.edu/Research/vmd/plugins/molfile/grdplugin.html
  http://www.ks.uiuc.edu/Research/vmd/plugins/molfile/phiplugin.html

  John Stone
  vmd_at_ks.uiuc.edu

On Mon, Jan 24, 2005 at 11:52:53PM +0530, N. Chitra wrote:
> Dear Sir,
> I need to view the grasp output in VMD. there are many options to
> save the output and I don't know which one woule be compatible with the
> VMD program. I would be grateful if you could tell me which file format
> to use to view the grasp output.
> Thank you.
> Yours sincerely,
>
> --
> N. Chitra
> Research Assistant,
> C/O Prof. N. Srinivasan,
> Molecular Biophysics Unit,
> Indian Institute of Science, Bangalore.
> India - 560012.
> Mail :) chitra_at_mbu.iisc.ernet.in
> chitrainiitr_at_rediffmail.com 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349              
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078