VMD-L Mailing List

From: Patti Schaefer (psschaefer_at_wisc.edu)
Date: Mon Nov 15 2004 - 15:28:15 CST

Hi,

I am trying to find a way to map electrostatic potential results to
atomic positions and create a graphical representation of the results.

I have used CHARMM to calculate the electrostatic potential using the
finite difference PB algorithm. The results give me the electrostatic
potential at grid points whose dimensions I have specified. Does
anyone know an easy way to map those results onto the atomic
coordinates of my protein and then use VMD to color the protein
accordingly? Is this possible with VMD?

thanks!
Patti