VMD-L Mailing List

From: RAHUL SURESH (drrahulsuresh_at_gmail.com)
Date: Mon Sep 18 2017 - 05:07:39 CDT

I have my VMD for CUDA downloaded and installed using he folowing commands

./configure
cd src/
sudo make install

and on caling VMD i get the following message

*viji_at_viji-X10SRA-F-Invalid-entry-length-16-Fixed-up-to-11:~/Downloads/VMD-CUDA/vmd-1.9.3/src$
vmd*
/usr/local/lib/vmd/vmd_LINUXAMD64: /usr/lib/nvidia-375/libGL.so.1: no
version information available (required by
/usr/local/lib/vmd/vmd_LINUXAMD64)
Info) VMD for LINUXAMD64, version 1.9.3 (November 30, 2016)
Info) http://www.ks.uiuc.edu/Research/vmd/
Info) Email questions and bug reports to vmd_at_ks.uiuc.edu
Info) Please include this reference in published work using VMD:
Info) Humphrey, W., Dalke, A. and Schulten, K., `VMD - Visual
Info) Molecular Dynamics', J. Molec. Graphics 1996, 14.1, 33-38.
Info) -------------------------------------------------------------
Info) Multithreading available, 16 CPUs detected.
Info) CPU features: SSE2 AVX AVX2 FMA
Info) Free system memory: 61GB (96%)
Info) Creating CUDA device pool and initializing hardware...
Info) Detected 1 available CUDA accelerator:
Info) [0] Quadro K1200 4 SM_5.0 @ 1.03 GHz, 3.9GB RAM, KTO, AE1, ZCP

*Warning) Detected X11 'Composite' extension: if incorrect display
occursWarning) try disabling this X server option. Most OpenGL
driversWarning) disable stereoscopic display when 'Composite' is enabled.*
Info) OpenGL renderer: Quadro K1200/PCIe/SSE2
Info) Features: STENCIL MSAA(4) MDE CVA MTX NPOT PP PS GLSL(OVFGS)
Info) Full GLSL rendering mode is available.
Info) Textures: 2-D (16384x16384), 3-D (4096x4096x4096), Multitexture (4)
Info) Detected 1 available TachyonL/OptiX ray tracing accelerator
Info) Compiling 1 OptiX shaders on 1 target GPU...
Info) Dynamically loaded 2 plugins in directory:
Info) /usr/local/lib/vmd/plugins/LINUXAMD64/molfile

*couldn't load file
"/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64/Routines/Other/sqlite/64B/libtclsqlite3.so":
/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64/Routines/Other/sqlite/64B/libtclsqlite3.so:
cannot open shared object file: No such file or
directory/usr/local/lib/vmd/scripts/tcl8.5 /usr/local/lib/vmd/scripts
/usr/local/lib/lib /Projects/johns/tcl/8.5.6/lib_LINUXAMD64/lib
/usr/local/lib/vmd/scripts/tk8.5 /usr/local/lib/vmd/scripts/tk8.5/ttk
/usr/local/lib/vmd/scripts/vmd /usr/local/lib/vmd/plugins/LINUXAMD64/tcl
/usr/local/lib/vmd/plugins/noarch/tcl
/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64//usr/local/lib/vmd/scripts/tcl8.5
/usr/local/lib/vmd/scripts /usr/local/lib/lib
/Projects/johns/tcl/8.5.6/lib_LINUXAMD64/lib
/usr/local/lib/vmd/scripts/tk8.5 /usr/local/lib/vmd/scripts/tk8.5/ttk
/usr/local/lib/vmd/scripts/vmd /usr/local/lib/vmd/plugins/LINUXAMD64/tcl
/usr/local/lib/vmd/plugins/noarch/tcl
/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64/
/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64/Routines/Lib/usr/local/lib/vmd/scripts/tcl8.5
/usr/local/lib/vmd/scripts /usr/local/lib/lib
/Projects/johns/tcl/8.5.6/lib_LINUXAMD64/lib
/usr/local/lib/vmd/scripts/tk8.5 /usr/local/lib/vmd/scripts/tk8.5/ttk
/usr/local/lib/vmd/scripts/vmd /usr/local/lib/vmd/plugins/LINUXAMD64/tcl
/usr/local/lib/vmd/plugins/noarch/tcl
/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64/
/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64/Routines/Lib
/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64/Routines/Other/usr/local/lib/vmd/scripts/tcl8.5
/usr/local/lib/vmd/scripts /usr/local/lib/lib
/Projects/johns/tcl/8.5.6/lib_LINUXAMD64/lib
/usr/local/lib/vmd/scripts/tk8.5 /usr/local/lib/vmd/scripts/tk8.5/ttk
/usr/local/lib/vmd/scripts/vmd /usr/local/lib/vmd/plugins/LINUXAMD64/tcl
/usr/local/lib/vmd/plugins/noarch/tcl
/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64/
/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64/Routines/Lib
/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64/Routines/Other
/home/viji/Downloads/vmd-1.9.3/plugins/LINUXAMD64/Routines/Other/graphThe
VolArea package could not be loaded:*

vmd >

What does the above thing suggests?

Any post regarding this would be really hellpful 

-- 
*Regards,*
*Rahul Suresh*
*Research Scholar*
*Bharathiar University*
*Coimbatore*