VMD-L Mailing List

From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Thu Jan 05 2017 - 16:25:48 CST

On Thu, Jan 5, 2017 at 4:58 PM, Smolin, Nikolai
<nikolai.smolin_at_gmail.com> wrote:
> Sear VMD users,
>
> I am trying to load big xtc file in VMD 1.9.3 (also tried 1.9.1 and 1.9.2)
> in Windows 7.
>
> Files size : about 24 GB, 100k frames about 70k atoms.
>
> after loading about 10% of trajectory I am recievieng following error
> message:
>
> gromacsplugin) Error reading timestep, file does not match format.
>
>
>
> I am able to load whole file in Linux using VMD1.9.1
>
> Any suggestions?

use linux! ;-)

windows binaries of VMD are 32-bit (check the fine print on the VMD
download side) and thus cannot handle large data sets, even if your
windows machine itself has the specs to handle it..

axel.

>
>
> Thanks
>
> Nikolai
>
>
>
> ---------------------------------------------------------------------------------------------------------
> Nikolai Smolin, Ph.D.
> Staff Scientist
> Department of Cell and Molecular Physiology
> Center for Translational Research and Education
> Loyola University Chicago
> 2160 South First Avenue
> Maywood, IL 60153
> Phone : (708) 216-5158
> E-mail : nikolai.smolin_at_gmail.com
> E-mail : nsmolin_at_luc.edu
> in: https://www.linkedin.com/in/nikolaismolin
> www : https://sites.google.com/site/nikolaismolin/ 

-- 
Dr. Axel Kohlmeyer  akohlmey_at_gmail.com  http://goo.gl/1wk0
College of Science & Technology, Temple University, Philadelphia PA, USA
International Centre for Theoretical Physics, Trieste. Italy.