From: Thierry Oscar Wambo (
Date: Wed Apr 22 2015 - 12:56:27 CDT

Good morning everyone!

I have a non symmetric system (different ionic concentrations across the membrane). I would like to apply boundaries to keep all the atoms within the cell using TclBC option of NAMD to do so. Please, can anyone guide me through this? or does anyone have a draft of a TclBC script which can help me to do the job?

Thank you!