VMD-L Mailing List
From: Tristan Croll (tristan.croll_at_qut.edu.au)
Date: Mon Oct 06 2014 - 03:12:31 CDT
- Next message: Norman Geist: "AW: log colorscale"
- Previous message: Axel Kohlmeyer: "Re: log colorscale"
- In reply to: Eric Smoll: "log colorscale"
- Next in thread: Norman Geist: "AW: log colorscale"
- Reply: Norman Geist: "AW: log colorscale"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
Why not just put the log of the beta values into the user field and colour by that?
set sel [atomselect top all]
foreach i [$sel get index] {
set thissel [atomselect top "index $i"]
set thisbeta [$thissel get beta]
$thissel set user [ expr log10 ( $thisbeta ) ]
$thissel delete
}
$all delete
Tristan Croll
Lecturer
Faculty of Health
School of Biomedical Sciences
Institute of Health and Biomedical Engineering
Queensland University of Technology
60 Musk Ave
Kelvin Grove QLD 4059 Australia
+61 7 3138 6443
This email and its attachments (if any) contain confidential information intended for use by the addressee and may be privileged. We do not waive any confidentiality, privilege or copyright associated with the email or the attachments. If you are not the intended addressee, you must not use, transmit, disclose or copy the email or any attachments. If you receive this email by mistake, please notify the sender immediately and delete the original email.
> On 6 Oct 2014, at 7:26 am, "Eric Smoll" <ericsmoll_at_gmail.com> wrote:
>
> Hello VMD users,
>
> Is there a simple way to apply a logarithmic color scale based on the beta parameter values in VMD?
>
> Best,
> Eric
- Next message: Norman Geist: "AW: log colorscale"
- Previous message: Axel Kohlmeyer: "Re: log colorscale"
- In reply to: Eric Smoll: "log colorscale"
- Next in thread: Norman Geist: "AW: log colorscale"
- Reply: Norman Geist: "AW: log colorscale"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]