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From: bharat gupta (bharat.85.monu_at_gmail.com)
Date: Thu May 29 2014 - 21:23:18 CDT
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Okay.. if thats the case, then how can I get the hydrogen bond information
for each interacting atom of a residue .??
On Fri, May 30, 2014 at 11:18 AM, John Stone <johns_at_ks.uiuc.edu> wrote:
> Hi,
> JC Gumbart already answered your question previously, did you see
> his response?:
> >
> > This can happen because two residues can form more than one h-bond at
> once.
> >
>
> Cheers,
> John Stone
> vmd_at_ks.uiuc.edu
>
>
> On Fri, May 30, 2014 at 10:55:55AM +0900, bharat gupta wrote:
> > Hi,
> > I calculated the hydrogen bond occupancy for a residue during 10 ns
> > simulation. I found that for one hydrogen bond pair the occupancy is
> > around 130%?? Why the percentage is more than 100%??A
> > --
> > Bharat
>
> --
> NIH Center for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> http://www.ks.uiuc.edu/~johns/ Phone: 217-244-3349
> http://www.ks.uiuc.edu/Research/vmd/
>
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