VMD-L Mailing List
From: John Stone (johns_at_ks.uiuc.edu)
Date: Thu May 29 2014 - 21:18:48 CDT
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Hi,
JC Gumbart already answered your question previously, did you see
his response?:
>
> This can happen because two residues can form more than one h-bond at once.
>
Cheers,
John Stone
vmd_at_ks.uiuc.edu
On Fri, May 30, 2014 at 10:55:55AM +0900, bharat gupta wrote:
> Hi,
> I calculated the hydrogen bond occupancy for a residue during 10 ns
> simulation. I found that for one hydrogen bond pair the occupancy is
> around 130%?? Why the percentage is more than 100%??A
> --
> Bharat
-- NIH Center for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 http://www.ks.uiuc.edu/~johns/ Phone: 217-244-3349 http://www.ks.uiuc.edu/Research/vmd/
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