VMD-L Mailing List

From: Bryan Roessler (roessler_at_uab.edu)
Date: Tue Apr 15 2014 - 09:52:18 CDT

Oops, I'll repost.

*Bryan Roessler | Graduate Research Assistant*
UAB | The University of Alabama at Birmingham
*uab.edu/cmdb <http://uab.edu/cmdb>*
Knowledge that will change your world

On Mon, Apr 14, 2014 at 4:56 PM, Axel Kohlmeyer <akohlmey_at_gmail.com> wrote:

> On Mon, Apr 14, 2014 at 11:11 PM, Bryan Roessler <roessler_at_uab.edu> wrote:
> > Hello,
> >
> > What would be the best way to slowly increase the constraint force on a
> > dihedral angle during a simulation? Is there a way to alter the
> extrabonds
> > force parameter while the simulation is running? Where would I make the
> > incrementing loop statement, in the namd configuration file, in the
> > extrabonds file, or somewhere else?
>
> before you add any more questions... wouldn't it be better to ask all
> those questions about NAMD on the namd-l mailing list?
>
> axel.
> > Thank you,
> >
> > Bryan Roessler | Graduate Research Assistant
> > UAB | The University of Alabama at Birmingham
> > uab.edu/cmdb
> > Knowledge that will change your world
> >
>
>
>
> --
> Dr. Axel Kohlmeyer akohlmey_at_gmail.com http://goo.gl/1wk0
> College of Science & Technology, Temple University, Philadelphia PA, USA
> International Centre for Theoretical Physics, Trieste. Italy.
>