VMD-L Mailing List

From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Mon Apr 14 2014 - 16:56:59 CDT

On Mon, Apr 14, 2014 at 11:11 PM, Bryan Roessler <roessler_at_uab.edu> wrote:
> Hello,
>
> What would be the best way to slowly increase the constraint force on a
> dihedral angle during a simulation? Is there a way to alter the extrabonds
> force parameter while the simulation is running? Where would I make the
> incrementing loop statement, in the namd configuration file, in the
> extrabonds file, or somewhere else?

before you add any more questions... wouldn't it be better to ask all
those questions about NAMD on the namd-l mailing list?

axel.
> Thank you,
>
> Bryan Roessler | Graduate Research Assistant
> UAB | The University of Alabama at Birmingham
> uab.edu/cmdb
> Knowledge that will change your world
> 

-- 
Dr. Axel Kohlmeyer  akohlmey_at_gmail.com  http://goo.gl/1wk0
College of Science & Technology, Temple University, Philadelphia PA, USA
International Centre for Theoretical Physics, Trieste. Italy.