VMD-L Mailing List

From: Dawid das (addiw7_at_googlemail.com)
Date: Mon Mar 03 2014 - 15:25:14 CST

Dear vmd specialists,

I want to do following thing.
Let's say I have a reference structure and 50 others.
Now I want to align those 50 on the reference structure.
When I do it I want to save new xyz coordinates for 50
transformed structures. Is it possible at all?

How do I specify that my first structure is actually the reference one?

Thanks in advance,
Dawid Grabarek