VMD-L Mailing List
From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue May 07 2013 - 14:38:47 CDT
- Next message: Josh Vermaas: "Re: convert pdb file from angstorm to nm units"
- Previous message: Nandigana, Vishal Venkata Raghave: "convert pdb file from angstorm to nm units"
- In reply to: Nandigana, Vishal Venkata Raghave: "convert pdb file from angstorm to nm units"
- Next in thread: Josh Vermaas: "Re: convert pdb file from angstorm to nm units"
- Maybe reply: Josh Vermaas: "Re: convert pdb file from angstorm to nm units"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
Hi,
You can do that pretty easily, all you have to do
is divide by 10. The question is, what do you want to
do with the data once you have modified the coordinates?
Valid PDB files are always in Angstroms, so you wouldn't
want to write a new PDB file with nm coordinates. What
are you trying to do?
Cheers,
John Stone
vmd_at_ks.uiuc.edu
On Tue, May 07, 2013 at 06:55:18PM +0000, Nandigana, Vishal Venkata Raghave wrote:
> Hi All,
>
> I am relatively new to VMD. I would like to know if it is possible to convert the units of a pdb file from Angstorm to nanometer.
>
> Thanks
>
> Regards,
> Vishal
-- NIH Center for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 http://www.ks.uiuc.edu/~johns/ Phone: 217-244-3349 http://www.ks.uiuc.edu/Research/vmd/
- Next message: Josh Vermaas: "Re: convert pdb file from angstorm to nm units"
- Previous message: Nandigana, Vishal Venkata Raghave: "convert pdb file from angstorm to nm units"
- In reply to: Nandigana, Vishal Venkata Raghave: "convert pdb file from angstorm to nm units"
- Next in thread: Josh Vermaas: "Re: convert pdb file from angstorm to nm units"
- Maybe reply: Josh Vermaas: "Re: convert pdb file from angstorm to nm units"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]