From: Yarrow Madrona (
Date: Thu Mar 28 2013 - 15:45:02 CDT


I have 17 long trajectories (50Gigs total). I really am only interested in
what is happening to a heme cofactor and ligand. I would like to strip
everything else from the PSF and from the DCD.

The reason for this is, I can't load this dcd onto my laptop and creating
a summary-shorter dcd is not an option.

My question is: How can I strip the dcd in the command line in VMD.

Yarrow Madrona
Graduate Student
Molecular Biology and Biochemistry Dept.
University of California, Irvine
Natural Sciences I, Rm 2403
Irvine, CA 92697