VMD-L Mailing List

From: Sindrila Dutta Banik (sindrila_at_iitk.ac.in)
Date: Mon Feb 18 2013 - 00:56:07 CST

Dear all,

I have a trajectory file, which I loaded into VMD. Now want to save the
coordinates of waters within 10A separation from the substrate. I am able
to visualize to this using the following command:

waters within 10 of index 6094

but as soon as I am going to save this coordinates for water which are
with in 10A it writes few coordinate partially means one O and one H not
the second one. How to save the coordinates completely.

With best regards
sindrila 

-- 
Sindrila Dutta Banik
C/O Prof. A. Chandra
Project Scientist
Department of Chemistry
IIT Kanpur
UP 208016