VMD-L Mailing List

From: Ban Arn (ban.arn_at_gmail.com)
Date: Wed Nov 21 2012 - 04:19:09 CST

Hi all

Thanks for the reply.

John, I contacted Oliver through the above mail id, but didnt get any reply
from him.

And Brain thanks for the alternative program, however the program works for
single pdb structure.

I'm want to calculate the same for simulation trajectories.

Kindly advice.

Many Thanks
Balaji

On Tue, Nov 20, 2012 at 6:14 PM, Bennion, Brian <Bennion1_at_llnl.gov> wrote:

> this program might work for your needs
> http://mole.upol.cz/
>
>
> ________________________________________
> From: owner-vmd-l_at_ks.uiuc.edu [owner-vmd-l_at_ks.uiuc.edu] on behalf of John
> Stone [johns_at_ks.uiuc.edu]
> Sent: Tuesday, November 20, 2012 8:54 AM
> To: Ban Arn
> Cc: vmd-l_at_ks.uiuc.edu
> Subject: Re: vmd-l: Hole program for vmd hole tcl script
>
> Hi,
> I recommend contacting Olver Smart, the author of HOLE
> and ask him where to download it. The link on his page doesn't
> work currently:
> http://www.globalphasing.com/people/osmart/
>
> Cheers,
> John Stone
> vmd_at_ks.uiuc.edu
>
> On Tue, Nov 20, 2012 at 02:59:20PM +0000, Ban Arn wrote:
> > Dear VMD users
> > I am looking for download link for HOLE program.
> > I came across the following thread in vmd
> > (http://www.ks.uiuc.edu/Research/vmd/mailing_list/vmd-l/3461.html)
> > Can anyone help me in this regard.
> > Sorry for posting other threads that are not related to vmd.
> > Many Thanks
> > Balaji
>
> --
> NIH Resource for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> http://www.ks.uiuc.edu/~johns/ Phone: 217-244-3349
> http://www.ks.uiuc.edu/Research/vmd/ Fax: 217-244-6078
>