VMD-L Mailing List

From: Vlad Cojocaru (vlad.cojocaru_at_mpi-muenster.mpg.de)
Date: Wed Aug 22 2012 - 09:49:16 CDT

Thanks John,

I read through the VMD CVS documentation and I realized that this a new
plugin .. I retrieved it and not the plugins built properly.
However, I have another problem, which seems to be related to CUDA. When
I build VMD, I get the error below. I am using cuda 4.2.9.

Best,
Vlad

tmpxft_00000c64_00000000-6_CUDAQuickSurf.compute_20.cudafe1.cpp:(.text+0x2820):
undefined reference to `CUDAMarchingCubes::~CUDAMarchingCubes()'
tmpxft_00000c64_00000000-6_CUDAQuickSurf.compute_20.cudafe1.cpp:(.text+0x283d):
undefined reference to `CUDAMarchingCubes::CUDAMarchingCubes()'
tmpxft_00000c64_00000000-6_CUDAQuickSurf.compute_20.cudafe1.cpp:(.text+0x2858):
undefined reference to `CUDAMarchingCubes::Initialize(uint3)'
tmpxft_00000c64_00000000-6_CUDAQuickSurf.compute_20.cudafe1.cpp:(.text+0x2cc4):
undefined reference to `CUDAMarchingCubes::SetVolumeData(float*, float*,
uint3, float3, float3, bool)'
tmpxft_00000c64_00000000-6_CUDAQuickSurf.compute_20.cudafe1.cpp:(.text+0x2d6d):
undefined reference to `CUDAMarchingCubes::SetSubVolume(uint3, uint3)'
tmpxft_00000c64_00000000-6_CUDAQuickSurf.compute_20.cudafe1.cpp:(.text+0x2d8d):
undefined reference to `CUDAMarchingCubes::computeIsosurface(float3*,
float3*, float3*, unsigned int)'
tmpxft_00000c64_00000000-6_CUDAQuickSurf.compute_20.cudafe1.cpp:(.text+0x2e01):
undefined reference to `DispCmdTriMesh::cuda_putdata(float const*, float
const*, float const*, int, VMDDisplayList*)'
tmpxft_00000c64_00000000-6_CUDAQuickSurf.compute_20.cudafe1.cpp:(.text+0x30de):
undefined reference to `DispCmdTriMesh::cuda_putdata(float const*, float
const*, float const*, int, VMDDisplayList*)'
tmpxft_00000c64_00000000-6_CUDAQuickSurf.compute_20.cudafe1.cpp:(.text+0x33af):
undefined reference to `CUDAMarchingCubes::CUDAMarchingCubes()'
tmpxft_00000c64_00000000-6_CUDAQuickSurf.compute_20.cudafe1.cpp:(.text+0x33ca):
undefined reference to `CUDAMarchingCubes::Initialize(uint3)'
collect2: ld returned 1 exit status
make: *** [vmd_LINUXAMD64] Error 1

On 08/22/2012 04:34 PM, John Stone wrote:
> Vlad,
> Please try doing a "cvs update -PAd" in the top level plugins directory
> to make sure you get the new vmdprefs plugin. That should solve the error
> you got below.
>
> Cheers,
> John Stone
> vmd_at_ks.uiuc.edu
>
> On Wed, Aug 22, 2012 at 11:41:21AM +0200, Vlad Cojocaru wrote:
>> Thanks John,
>>
>> I updated the CVS but now I get other missing directory error (see below):
>>
>> Best,
>> Vlad
>>
>> Copying volutil 1.3 files to
>> Copying vmddebug 1.0 files to
>> /usr/local/apps/vmd/2012-08-21-SRC/lib/plugins/noarch/tcl/vmddebug1.0
>> Copying vmdmovie 1.9 files to
>> /usr/local/apps/vmd/2012-08-21-SRC/lib/plugins/noarch/tcl/vmdmovie1.9
>> /bin/sh: line 0: cd: vmdprefs: No such file or directory
>> make: *** [distrib] Error 1
>>
>> On 08/21/2012 06:06 PM, Vlad Cojocaru wrote:
>>> Dear all,
>>>
>>> I am trying to compile the vmd cvs code downloaded today and while
>>> building the plugins, I get the error below (build script also
>>> provided below).
>>> It looks as if some gif files are missing .... Does anybody know how
>>> to fix this ?
>>>
>>> Thanks
>>> Vlad
>>>
>>> ----------------script used to build plugins ----------------
>>> #!/bin/bash
>>>
>>> export TCLINC="-I/usr/include"
>>> export TCLLIB="-L/usr/lib64"
>>>
>>> export NETCDFINC="-I/usr/include"
>>> export NETCDFLIB="-I/usr/lib64"
>>>
>>> make clean
>>> make LINUXAMD64 TCLINC=$TCLINC TCLLIB=$TCLLIB NETCDFINC=$NETCDFINC
>>> NETCDFLIB=$NETCDFLIB 2>&1 | tee make.log
>>> export PLUGINDIR="/usr/local/apps/vmd/2012-08-21-SRC/lib/plugins"
>>> make distrib 2>&1 | tee make_distrib.log
>>>
>>> exit
>>>
>>> -----------------error--------------------
>>> Copying molfile plugins to
>>> /usr/local/apps/vmd/2012-08-21-SRC/lib/plugins destination area
>>> abinitplugin.so ...
>>> biomoccaplugin.so ...
>>> cpmdplugin.so ...
>>> psfplugin.so ...
>>> pdbplugin.so ...
>>> dcdplugin.so ...
>>> babelplugin.so ...
>>> gromacsplugin.so ...
>>> parmplugin.so ...
>>> crdplugin.so ...
>>> namdbinplugin.so ...
>>> binposplugin.so ...
>>> graspplugin.so ...
>>> msmsplugin.so ...
>>> stlplugin.so ...
>>> offplugin.so ...
>>> cubeplugin.so ...
>>> edmplugin.so ...
>>> ccp4plugin.so ...
>>> dsn6plugin.so ...
>>> brixplugin.so ...
>>> pltplugin.so ...
>>> raster3dplugin.so ...
>>> parm7plugin.so ...
>>> rst7plugin.so ...
>>> tinkerplugin.so ...
>>> uhbdplugin.so ...
>>> vaspchgcarplugin.so ...
>>> vaspparchgplugin.so ...
>>> vaspposcarplugin.so ...
>>> vaspoutcarplugin.so ...
>>> vaspxdatcarplugin.so ...
>>> vaspxmlplugin.so ...
>>> dlpolyplugin.so ...
>>> lammpsplugin.so ...
>>> vtfplugin.so ...
>>> xyzplugin.so ...
>>> corplugin.so ...
>>> moldenplugin.so ...
>>> phiplugin.so ...
>>> pbeqplugin.so ...
>>> grdplugin.so ...
>>> situsplugin.so ...
>>> dxplugin.so ...
>>> spiderplugin.so ...
>>> mapplugin.so ...
>>> avsplugin.so ...
>>> fs4plugin.so ...
>>> pqrplugin.so ...
>>> mol2plugin.so ...
>>> gridplugin.so ...
>>> carplugin.so ...
>>> mdfplugin.so ...
>>> gamessplugin.so ...
>>> xsfplugin.so ...
>>> bgfplugin.so ...
>>> xbgfplugin.so ...
>>> jsplugin.so ...
>>> dtrplugin.so ...
>>> maeffplugin.so ...
>>> basissetplugin.so ...
>>> webpdbplugin.so ...
>>> netcdfplugin.so ...
>>> hoomdplugin.so ...
>>> dmsplugin.so ...
>>> libmolfile_plugin.a ...
>>> libmolfile_plugin.h ...
>>> libmolfile_plugin.lib ...
>>> libmolfile_plugin.h ...
>>> Copying apbsrun 1.3 files to
>>> /usr/local/apps/vmd/2012-08-21-SRC/lib/plugins/noarch/tcl/apbsrun1.3
>>> Copying atomedit 1.0 files to
>>> /usr/local/apps/vmd/2012-08-21-SRC/lib/plugins/noarch/tcl/atomedit1.0
>>> This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2011)
>>> restricted \write18 enabled.
>>> entering extended mode
>>> (./ug.tex
>>> LaTeX2e <2009/09/24>
>>> Babel <v3.8l> and hyphenation patterns for english, dumylang,
>>> nohyphenation, ge
>>> rman-x-2009-06-19, ngerman-x-2009-06-19, afrikaans, ancientgreek,
>>> ibycus, arabi
>>> c, armenian, basque, bulgarian, catalan, pinyin, coptic, croatian,
>>> czech, danis
>>> h, dutch, ukenglish, usenglishmax, esperanto, estonian, ethiopic,
>>> farsi, finnis
>>> h, french, galician, german, ngerman, swissgerman, monogreek, greek,
>>> hungarian,
>>> icelandic, assamese, bengali, gujarati, hindi, kannada, malayalam,
>>> marathi, or
>>> iya, panjabi, tamil, telugu, indonesian, interlingua, irish, italian,
>>> kurmanji,
>>> lao, latin, latvian, lithuanian, mongolian, mongolianlmc, bokmal,
>>> nynorsk, pol
>>> ish, portuguese, romanian, russian, sanskrit, serbian, serbianc,
>>> slovak, sloven
>>> ian, spanish, swedish, turkish, turkmen, ukrainian, uppersorbian,
>>> welsh, loaded
>>> .
>>> (/usr/share/texmf/tex/latex/base/article.cls
>>> Document Class: article 2007/10/19 v1.4h Standard LaTeX document class
>>> (/usr/share/texmf/tex/latex/base/size10.clo))
>>> (/usr/share/texmf/tex/latex/graphics/graphicx.sty
>>> (/usr/share/texmf/tex/latex/graphics/keyval.sty)
>>> (/usr/share/texmf/tex/latex/graphics/graphics.sty
>>> (/usr/share/texmf/tex/latex/graphics/trig.sty)
>>> (/usr/share/texmf/tex/latex/latexconfig/graphics.cfg)
>>> (/usr/share/texmf/tex/latex/pdftex-def/pdftex.def
>>> (/usr/share/texmf/tex/generic/oberdiek/infwarerr.sty)
>>> (/usr/share/texmf/tex/generic/oberdiek/ltxcmds.sty))))
>>> (/usr/lib/texmf/tex/latex/html/html.sty
>>> (/usr/share/texmf/tex/latex/hyperref/hyperref.sty
>>> (/usr/share/texmf/tex/generic/oberdiek/hobsub-hyperref.sty
>>> (/usr/share/texmf/tex/generic/oberdiek/hobsub-generic.sty))
>>> (/usr/share/texmf/tex/generic/ifxetex/ifxetex.sty)
>>> (/usr/share/texmf/tex/latex/oberdiek/kvoptions.sty)
>>> (/usr/share/texmf/tex/latex/hyperref/pd1enc.def)
>>> (/usr/share/texmf/tex/latex/latexconfig/hyperref.cfg)
>>> (/usr/share/texmf/tex/latex/url/url.sty))
>>>
>>> Package hyperref Message: Driver (autodetected): hpdftex.
>>>
>>> (/usr/share/texmf/tex/latex/hyperref/hpdftex.def
>>> (/usr/share/texmf/tex/latex/oberdiek/rerunfilecheck.sty)))
>>> (./ug_macros.tex)
>>> No file ug.aux.
>>> (/usr/share/texmf/tex/context/base/supp-pdf.mkii
>>> [Loading MPS to PDF converter (version 2006.09.02).]
>>> ) (/usr/share/texmf/tex/latex/oberdiek/epstopdf-base.sty
>>> (/usr/share/texmf/tex/latex/oberdiek/grfext.sty)
>>> (/usr/share/texmf/tex/latex/latexconfig/epstopdf-sys.cfg))
>>> (/usr/share/texmf/tex/latex/hyperref/nameref.sty
>>> (/usr/share/texmf/tex/generic/oberdiek/gettitlestring.sty))
>>> (./ug_title.tex)
>>> [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] (./ug_text.tex
>>> Underfull \hbox (badness 10000) in paragraph at lines 10--11
>>>
>>> (/usr/share/texmf/tex/latex/base/omscmr.fd)
>>> <autoimd-diagram.pdf, id=19, 301.125pt x 288.07625pt>
>>> <use autoimd-diagram.pdf>
>>>
>>> LaTeX Warning: Reference `fig:autoimd-diagram' on page 3 undefined on
>>> input lin
>>> e 31.
>>>
>>> [3 <./autoimd-diagram.pdf>]
>>>
>>> LaTeX Warning: Reference `par:customize' on page 4 undefined on input
>>> line 58.
>>>
>>>
>>> LaTeX Warning: Reference `fig:autoimd-GUI' on page 4 undefined on
>>> input line 78
>>> .
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 78--79
>>>
>>> <autoimd-GUI.pdf, id=45, 431.6125pt x 298.11375pt> <use autoimd-GUI.pdf>
>>>
>>> LaTeX Warning: Reference `fig:simsettings-GUI' on page 4 undefined on
>>> input lin
>>> e 85.
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 85--86
>>>
>>> <simsettings-GUI.pdf, id=46, 543.02875pt x 443.6575pt>
>>> <use simsettings-GUI.pdf>
>>> Underfull \hbox (badness 10000) in paragraph at lines 91--92
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 96--97
>>>
>>> [4 <./autoimd-GUI.pdf>]
>>> Underfull \hbox (badness 10000) in paragraph at lines 100--101
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 104--105
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 106--107
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 111--112
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 115--116
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 118--119
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 125--126
>>>
>>> [5 <./simsettings-GUI.pdf>]
>>> Underfull \hbox (badness 10000) in paragraph at lines 130--131
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 134--135
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 140--141
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 170--171
>>>
>>> [6]
>>> Underfull \hbox (badness 10000) in paragraph at lines 194--195
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 207--208
>>>
>>> [7]
>>> Underfull \hbox (badness 10000) in paragraph at lines 254--255
>>>
>>> ) [8] (./ug.aux)
>>>
>>> Package rerunfilecheck Warning: File `ug.out' has changed.
>>> (rerunfilecheck) Rerun to get outlines right
>>> (rerunfilecheck) or use package `bookmark'.
>>>
>>>
>>> LaTeX Warning: There were undefined references.
>>>
>>>
>>> LaTeX Warning: Label(s) may have changed. Rerun to get
>>> cross-references right.
>>>
>>> )
>>> (see the transcript file for additional
>>> information)</usr/share/texmf/fonts/typ
>>> e1/public/amsfonts/cm/cmbx10.pfb></usr/share/texmf/fonts/type1/public/amsfonts/
>>>
>>> cm/cmbx12.pfb></usr/share/texmf/fonts/type1/public/amsfonts/cm/cmbx8.pfb></usr/
>>>
>>> share/texmf/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/share/texmf/fonts/ty
>>>
>>> pe1/public/amsfonts/cm/cmr12.pfb></usr/share/texmf/fonts/type1/public/amsfonts/
>>>
>>> cm/cmr17.pfb></usr/share/texmf/fonts/type1/public/amsfonts/cm/cmr6.pfb></usr/sh
>>>
>>> are/texmf/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/share/texmf/fonts/type1
>>>
>>> /public/amsfonts/cm/cmr8.pfb></usr/share/texmf/fonts/type1/public/amsfonts/cm/c
>>>
>>> msl8.pfb></usr/share/texmf/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/shar
>>>
>>> e/texmf/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texmf/fonts/type1
>>>
>>> /public/amsfonts/cm/cmtt10.pfb>
>>> Output written on ug.pdf (8 pages, 319257 bytes).
>>> Transcript written on ug.log.
>>> This is pdfTeX, Version 3.1415926-2.3-1.40.12 (TeX Live 2011)
>>> restricted \write18 enabled.
>>> entering extended mode
>>> (./ug.tex
>>> LaTeX2e <2009/09/24>
>>> Babel <v3.8l> and hyphenation patterns for english, dumylang,
>>> nohyphenation, ge
>>> rman-x-2009-06-19, ngerman-x-2009-06-19, afrikaans, ancientgreek,
>>> ibycus, arabi
>>> c, armenian, basque, bulgarian, catalan, pinyin, coptic, croatian,
>>> czech, danis
>>> h, dutch, ukenglish, usenglishmax, esperanto, estonian, ethiopic,
>>> farsi, finnis
>>> h, french, galician, german, ngerman, swissgerman, monogreek, greek,
>>> hungarian,
>>> icelandic, assamese, bengali, gujarati, hindi, kannada, malayalam,
>>> marathi, or
>>> iya, panjabi, tamil, telugu, indonesian, interlingua, irish, italian,
>>> kurmanji,
>>> lao, latin, latvian, lithuanian, mongolian, mongolianlmc, bokmal,
>>> nynorsk, pol
>>> ish, portuguese, romanian, russian, sanskrit, serbian, serbianc,
>>> slovak, sloven
>>> ian, spanish, swedish, turkish, turkmen, ukrainian, uppersorbian,
>>> welsh, loaded
>>> .
>>> (/usr/share/texmf/tex/latex/base/article.cls
>>> Document Class: article 2007/10/19 v1.4h Standard LaTeX document class
>>> (/usr/share/texmf/tex/latex/base/size10.clo))
>>> (/usr/share/texmf/tex/latex/graphics/graphicx.sty
>>> (/usr/share/texmf/tex/latex/graphics/keyval.sty)
>>> (/usr/share/texmf/tex/latex/graphics/graphics.sty
>>> (/usr/share/texmf/tex/latex/graphics/trig.sty)
>>> (/usr/share/texmf/tex/latex/latexconfig/graphics.cfg)
>>> (/usr/share/texmf/tex/latex/pdftex-def/pdftex.def
>>> (/usr/share/texmf/tex/generic/oberdiek/infwarerr.sty)
>>> (/usr/share/texmf/tex/generic/oberdiek/ltxcmds.sty))))
>>> (/usr/lib/texmf/tex/latex/html/html.sty
>>> (/usr/share/texmf/tex/latex/hyperref/hyperref.sty
>>> (/usr/share/texmf/tex/generic/oberdiek/hobsub-hyperref.sty
>>> (/usr/share/texmf/tex/generic/oberdiek/hobsub-generic.sty))
>>> (/usr/share/texmf/tex/generic/ifxetex/ifxetex.sty)
>>> (/usr/share/texmf/tex/latex/oberdiek/kvoptions.sty)
>>> (/usr/share/texmf/tex/latex/hyperref/pd1enc.def)
>>> (/usr/share/texmf/tex/latex/latexconfig/hyperref.cfg)
>>> (/usr/share/texmf/tex/latex/url/url.sty))
>>>
>>> Package hyperref Message: Driver (autodetected): hpdftex.
>>>
>>> (/usr/share/texmf/tex/latex/hyperref/hpdftex.def
>>> (/usr/share/texmf/tex/latex/oberdiek/rerunfilecheck.sty)))
>>> (./ug_macros.tex)
>>> (./ug.aux) (/usr/share/texmf/tex/context/base/supp-pdf.mkii
>>> [Loading MPS to PDF converter (version 2006.09.02).]
>>> ) (/usr/share/texmf/tex/latex/oberdiek/epstopdf-base.sty
>>> (/usr/share/texmf/tex/latex/oberdiek/grfext.sty)
>>> (/usr/share/texmf/tex/latex/latexconfig/epstopdf-sys.cfg))
>>> (/usr/share/texmf/tex/latex/hyperref/nameref.sty
>>> (/usr/share/texmf/tex/generic/oberdiek/gettitlestring.sty)) (./ug.out)
>>> (./ug.out) (./ug_title.tex)
>>> [1{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.ma
>>> p}] (./ug.toc) [2] (./ug_text.tex
>>> Underfull \hbox (badness 10000) in paragraph at lines 10--11
>>>
>>> (/usr/share/texmf/tex/latex/base/omscmr.fd)
>>> <autoimd-diagram.pdf, id=55, 301.125pt x 288.07625pt>
>>> <use autoimd-diagram.pdf> [3 <./autoimd-diagram.pdf>]
>>> Underfull \hbox (badness 10000) in paragraph at lines 78--79
>>>
>>> <autoimd-GUI.pdf, id=82, 431.6125pt x 298.11375pt> <use autoimd-GUI.pdf>
>>> Underfull \hbox (badness 10000) in paragraph at lines 85--86
>>>
>>> <simsettings-GUI.pdf, id=84, 543.02875pt x 443.6575pt>
>>> <use simsettings-GUI.pdf>
>>> Underfull \hbox (badness 10000) in paragraph at lines 91--92
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 96--97
>>>
>>> [4 <./autoimd-GUI.pdf>]
>>> Underfull \hbox (badness 10000) in paragraph at lines 100--101
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 104--105
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 106--107
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 111--112
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 115--116
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 118--119
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 125--126
>>>
>>> [5 <./simsettings-GUI.pdf>]
>>> Underfull \hbox (badness 10000) in paragraph at lines 130--131
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 134--135
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 140--141
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 170--171
>>>
>>> [6]
>>> Underfull \hbox (badness 10000) in paragraph at lines 194--195
>>>
>>>
>>> Underfull \hbox (badness 10000) in paragraph at lines 207--208
>>>
>>> [7]
>>> Underfull \hbox (badness 10000) in paragraph at lines 254--255
>>>
>>> ) [8] (./ug.aux) )
>>> (see the transcript file for additional
>>> information)</usr/share/texmf/fonts/typ
>>> e1/public/amsfonts/cm/cmbx10.pfb></usr/share/texmf/fonts/type1/public/amsfonts/
>>>
>>> cm/cmbx12.pfb></usr/share/texmf/fonts/type1/public/amsfonts/cm/cmbx8.pfb></usr/
>>>
>>> share/texmf/fonts/type1/public/amsfonts/cm/cmr10.pfb></usr/share/texmf/fonts/ty
>>>
>>> pe1/public/amsfonts/cm/cmr12.pfb></usr/share/texmf/fonts/type1/public/amsfonts/
>>>
>>> cm/cmr17.pfb></usr/share/texmf/fonts/type1/public/amsfonts/cm/cmr6.pfb></usr/sh
>>>
>>> are/texmf/fonts/type1/public/amsfonts/cm/cmr7.pfb></usr/share/texmf/fonts/type1
>>>
>>> /public/amsfonts/cm/cmr8.pfb></usr/share/texmf/fonts/type1/public/amsfonts/cm/c
>>>
>>> msl8.pfb></usr/share/texmf/fonts/type1/public/amsfonts/cm/cmsy10.pfb></usr/shar
>>>
>>> e/texmf/fonts/type1/public/amsfonts/cm/cmti10.pfb></usr/share/texmf/fonts/type1
>>>
>>> /public/amsfonts/cm/cmtt10.pfb>
>>> Output written on ug.pdf (8 pages, 322174 bytes).
>>> Transcript written on ug.log.
>>> Copying autoimd 1.7 files to
>>> /usr/local/apps/vmd/2012-08-21-SRC/lib/plugins/noarch/tcl/autoimd1.7
>>> Copying autoionize 1.3 files to
>>> /usr/local/apps/vmd/2012-08-21-SRC/lib/plugins/noarch/tcl/autoionize1.3
>>> Copying bendix 1.0 files to
>>> /usr/local/apps/vmd/2012-08-21-SRC/lib/plugins/noarch/tcl/bendix1.0
>>> cp: cannot stat `doc/GUI-tips.gif': No such file or directory
>>> cp: cannot stat `doc/Monsieur_Bendix_smaller_still.gif': No such file
>>> or directory
>>> make[1]: *** [distrib] Error 1
>>> make: *** [distrib] Error 1
>>>
>> --
>> Dr. Vlad Cojocaru
>> Max Planck Institute for Molecular Biomedicine
>> Department of Cell and Developmental Biology
>> Röntgenstrasse 20, 48149 Münster, Germany
>> Tel: +49-251-70365-324; Fax: +49-251-70365-399
>> Email: vlad.cojocaru[at]mpi-muenster.mpg.de
>> http://www.mpi-muenster.mpg.de/research/teams/groups/rgcojocaru
>>
>> 

-- 
Dr. Vlad Cojocaru
Max Planck Institute for Molecular Biomedicine
Department of Cell and Developmental Biology
Röntgenstrasse 20, 48149 Münster, Germany
Tel: +49-251-70365-324; Fax: +49-251-70365-399
Email: vlad.cojocaru[at]mpi-muenster.mpg.de
http://www.mpi-muenster.mpg.de/research/teams/groups/rgcojocaru