VMD-L Mailing List
From: Wang Yi (dexterwy_at_gmail.com)
Date: Thu Aug 09 2012 - 15:00:42 CDT
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set allatoms [atomselect top all]
$allatoms get beta
You need to read the online manual for VMD keywords.
By the way, why extracting B-factors from trajectory? Is there any thing during your simulation will change the B-factor?
___________________________
Yi (Yves) Wang
Duke University
On 2012-8-9, at 下午3:13, flavio seixas wrote:
> Hi all,
>
> Anyone knows a tcl script to extract the B-factors values of protein residues (or atoms) from namd trajectory file?
>
> I´ll be thankful for any help.
>
> regards,
>
> flavio
>
>
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