VMD-L Mailing List
From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue Jun 05 2012 - 09:38:28 CDT
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Hi,
From your description it seems very likely that you ran out
of RAM before you finished loading the .xtc file. You should
make sure that if you're loading files larger than your physical
memory, that you skip frames, or load a subset of the trajectory
that will fit entirely into RAM.
Cheers,
John Stone
vmd_at_ks.uiuc.edu
On Tue, Jun 05, 2012 at 07:31:03PM +0530, arun kumar wrote:
> Dear all,
>
> I was trying to add frames from .xtc file of gromacs but instead of full
> loading the file , it stopped in between and showing the fallowing error
>
> Segmentation fault (Core dumped)
>
> can any one please say what is the problem and how to solve it.
> --
> Arun Kumar Somavarapu
> Project-JRF
> Dr. Prasanna's lab
> TMC, ACTREC
> Navi Mumbai-410210
-- NIH Resource for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 http://www.ks.uiuc.edu/~johns/ Phone: 217-244-3349 http://www.ks.uiuc.edu/Research/vmd/ Fax: 217-244-6078
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