VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Feb 08 2012 - 13:34:10 CST

Brian,
  I've forwarded your query to Anssi Nurminen who developed
and contributed these plugins. Hopefully Anssi can comment on
how best to accomplish this.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Mon, Feb 06, 2012 at 04:19:19PM -0800, Bennion, Brian wrote:
>
> Hello,
>
> Does anyone have a script or a clever way to transfer data generated by the rmsd visualizer to timestep dependent user defined fields in vmd?
>
> I would like to highlight rmsd changes in single residues as a function of time. The heatmap files that are generated might be one possibility but it would be nice transfer this data "in core" so to speak to other parts of VMD.
>
> Brian 

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NIH Resource for Macromolecular Modeling and Bioinformatics
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