From: Bennion, Brian (Bennion1_at_llnl.gov)
Date: Mon Feb 06 2012 - 18:19:19 CST

Hello,

Does anyone have a script or a clever way to transfer data generated by the rmsd visualizer to timestep dependent user defined fields in vmd?

I would like to highlight rmsd changes in single residues as a function of time. The heatmap files that are generated might be one possibility but it would be nice transfer this data "in core" so to speak to other parts of VMD.

Brian