VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue Sep 30 2003 - 10:17:49 CDT

Dear Hitoshi,
  There's not any special built-in feature for doing this, but since
VMD provides support for user-drawn graphics primitives via the scripting
interface, you should be able to do this with a Tcl script, depending on
what these specific visualizations involve:
  http://www.ks.uiuc.edu/Research/vmd/current/ug/node116.html
  http://www.ks.uiuc.edu/Research/vmd/current/ug/node113.html#ug:ui:text:draw

Some examples:
http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/highlight_bases/
http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/delaunay_triangulate/
http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/3Dgraph/

Thanks,
  John Stone
  vmd_at_ks.uiuc.edu

On Tue, Sep 30, 2003 at 05:31:55PM +0900, ?$B:,>k?(J ?$B6Q?(J wrote:
> Hi,This question might be addressed before but
> could anyone tell me if VMD has a capability to
> vizualize the vibrational, rotational modes
> of each bonds, functional groups in a molecule
> which are calculated by Gaussian?
> Thanks in advance.
> Hitoshi
> 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
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