VMD-L Mailing List

From: Edward Lyman (edward.lyman_at_gmail.com)
Date: Thu May 26 2011 - 10:33:27 CDT

Hi all,

I have a membrane protein system built with Maestro, which I can read
into vmd and write out pdb's for the water, membrane, protein etc. The
naming convention doesn't match charmm though, so I need to alias a
whole lot of atoms. Can anyone offer some effort saving tips for such
a job? (Apart from rebuilding the systme within vmd)

Thx,
Ed