VMD-L Mailing List

From: Lepore, Bryan (Bryan.Lepore_at_umassmed.edu)
Date: Wed Aug 18 2010 - 10:21:07 CDT

[ vmd 1.8.7 ]
[ ubuntu 10.4 ]

vmd reports "integer value too large to represent"

i do not know where to go from there.

details :

made a lipid-only pdb/psf box using autopsf and other things from Jeff Klauda's resources (thanks!).
didn't find any coordinate "0.000 0.000 0.000" atoms
looked at the pdb in VMD - atoms/bonds appear sensibly connected.
put them into lib/vmd/plugins/noarch/tcl/membrane1.0/
package require membrane
membrane -l dmpc_lipid_only_psfgen_output -x 90 -y 90
[ vmd appears to read files ok, reports sensible stats, then..]
integer value too large to represent
the graphics look ok, i didn't find the message in membrane.tcl, and popc works ok.
stumped - where/what is this integer value?

-bryan