VMD-L Mailing List

From: BIN ZHANG (zhngbn_at_gmail.com)
Date: Mon Aug 24 2009 - 11:21:41 CDT

Hi, Steve:

You can load your ligand and protein as two molecules. Then you can
use mouse to move the ligand after pressing 8.

best,
Bin
On Aug 24, 2009, at 8:37 AM, Steve Seibold wrote:

> I have constructed a ligand (ligand.pdb) and am trying to place it
> in a protein. I have used the TkConsole (moveby etc), but I was
> wondering if there is a way to the select the whole ligand and move
> it (actually change its coordinates) interactively with the mouse.
> This allows for a much more subtle movement in 3D, visually. Is this
> possible in VMD?
> Thanks, Steve