From: snoze pa (snoze.pa_at_gmail.com)
Date: Wed Jun 24 2009 - 11:04:15 CDT

Info) VMD for LINUX, version 1.8.7beta5 (June 1, 2009)
Info) http://www.ks.uiuc.edu/Research/vmd/
Info) Email questions and bug reports to vmd_at_ks.uiuc.edu
Info) Please include this reference in published work using VMD:
Info) Humphrey, W., Dalke, A. and Schulten, K., `VMD - Visual
Info) Molecular Dynamics', J. Molec. Graphics 1996, 14.1, 33-38.
Info) -------------------------------------------------------------
Info) Multithreading available, 2 CPUs detected.
Info) Free system memory: 1769MB (87%)
Info) No CUDA accelerator devices available.
Info) OpenGL renderer: Mesa DRI R200 20090101 x86/MMX/SSE2 TCL DRI2
Info) Features: STENCIL MDE CVA MTX PP PS
Info) GLSL rendering mode is NOT available.
Info) Textures: 2-D (4096x4096), 3-D (256x256x256), Multitexture (6)
CS section size missmatch start at (r200_state_init.c,ctx_emit_cs,510) 22 vs 26
CS section end at (r200_state_init.c,ctx_emit_cs,543)
CS section size missmatch start at (r200_state_init.c,ctx_emit_cs,510) 22 vs 26
CS section end at (r200_state_init.c,ctx_emit_cs,543)
CS section size missmatch start at (r200_state_init.c,ctx_emit_cs,510) 22 vs 26
CS section end at (r200_state_init.c,ctx_emit_cs,543)
CS section size missmatch start at (r200_state_init.c,ctx_emit_cs,510) 22 vs 26
CS section end at (r200_state_init.c,ctx_emit_cs,543)

Same is true with pymol. Only chimera is working fine in fedora 11..
fedora 11 uses new release of python.