VMD-L Mailing List

From: Ioana Cozmuta (ioana_at_nas.nasa.gov)
Date: Thu Feb 13 2003 - 17:43:44 CST

Hi vmd users,

Is the aligntool specially designed only for proteins? I am trying to
align two structures of nucleic acids and thought could use this tool to
calculate the RMSD. But I get an error saying that there are no alpha
carbons found in the files. So I assumed it does not work with other
structures than proteins...

Thanks,
Ioana