VMD-L Mailing List

From: Navdeep (navdeep79_at_gmail.com)
Date: Fri Sep 19 2008 - 16:43:25 CDT

Hi

I am trying to use solvate plugin but it requires that I must have a cubic
box of the solvent of choice. My question is
1) if I have a pdb and psf file for a single molecule of solvent, my case
ethanol, how can I make a cubic box.
2) How to make a box of arbitrary dimensions.

Is there any plugin available.

Thanks
Navdeep