VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Sun Jan 20 2008 - 22:54:33 CST

Hi,
  To me it sounds like you may be running a Linux distribution
that has problems with the interaction with Tk and internationalization.
I've seen this type of problem before with certain versions of Suse Linux,
but not for a while. What Linux distro and version are you running?
I've also forwarded your note to the author of RMSDTT in case he has
a suggestion.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Fri, Jan 18, 2008 at 07:15:07PM +0530, Monika Sharma wrote:
> Dear All,
> I have installed VMD-1.8.6 on Linux-AMD64 platform. I have done
> simulations on RNA systems. I wish to use RMSD Trajectory Tool plugin
> provided in VMD.
> But I am able to use it for nucleic acid selection. It says "Coordinates
> not found".
> The problem is that I am not able to change the default selection of
> "protein" to "nucleic" at the left top corner of RMSD trajectory tool
> dialog box. I have tried compilation of VMD with and without TCL and
> PYTHON. But in both cases I am not able to change the options. This I
> also observed in case of other plugins too, that I am not able to change
> the default options, like giving prefix name of output file, changing
> selection numbers, etc.
>
> If anyone can please help me out. All suggestions are welcome.
> Thanks in advance!!
> Regards,
> Monika
>
> 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078