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From: Axel Kohlmeyer (akohlmey_at_cmm.chem.upenn.edu)
Date: Mon Jan 14 2008 - 03:39:58 CST
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On 1/14/08, Sridhar Acharya <sridharfirst_at_gmail.com> wrote:
>
> I would like to know if there is script method to load several pdb molecules
> in batch mode and save them in mol2 format without using GUI.
yes. something like the following:
foreach p {file1.pdb file2.pdb file3.pdb} {
set m [mol new $p]
animate write mol2 "$p.mol2" $m
mol delete $m
}
for details please have a look at the description of the mol and animate
commands and consult your favorate tcl tutorial.
cheers,
axel.
>
>
-- ======================================================================= Axel Kohlmeyer akohlmey_at_cmm.chem.upenn.edu http://www.cmm.upenn.edu Center for Molecular Modeling -- University of Pennsylvania Department of Chemistry, 231 S.34th Street, Philadelphia, PA 19104-6323 tel: 1-215-898-1582, fax: 1-215-573-6233, office-tel: 1-215-898-5425 ======================================================================= If you make something idiot-proof, the universe creates a better idiot.
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