VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue Jun 12 2007 - 15:30:23 CDT

Hi,
  If the structures are similar but not identical, then I think
that the easiest method might be to use the MultiSeq plugin do
do the structure alignments for you, since it can handle the
structural differences more easily/automatically than some
of the other alignment tools can.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Tue, Jun 12, 2007 at 10:05:20AM -0700, lily jin wrote:
> Could VMD do supoposition for two similar structures?
> Thanks!
> Lily
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-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
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Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
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