VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Jun 21 2006 - 14:24:27 CDT

Hi,
  I talked to Jordi about this and this error occurs if you don't have
any atomic coordinates loaded. (e.g. a PSF file, but no PDB...)
Have you walked through the online documentation for AutoIMD yet?

Thanks,
  John Stone
  vmd_at_ks.uiuc.edu

On Thu, Jun 15, 2006 at 11:04:02AM +0200, Juan de Dios Lopez Castro wrote:
> Hi all,
>
> I have posted a menssage about autoimd. You had asked me about the
> versión of vmd. I don't know repost, so I going to post it other
> time.
>
> I have tried AUTOIMD on windows and Fedora Core 2. I get always
> the same error:
>
> atomsel: frame -1 out of range for molecule 1
> atomsel: frame -1 out of range for molecule 1
> while executing
> "$all writepdb "$pdbfile""
> (procedure "initparams" line 49)
> invoked from within
> "initparams"
> (procedure "AutoIMD::submit" line 12)
> invoked from within
> "AutoIMD::submit "$AutoIMD::settings::moltenseltext""
> invoked from within
> ".autoimd.win.controls.submit invoke"
> ("uplevel" body line 1)
> invoked from within
> "uplevel #0 [list $w invoke]"
> (procedure "tk::ButtonUp" line 22)
> invoked from within
> "tk::ButtonUp .autoimd.win.controls.submit
> "
> (command bound to event)
>
> The versión of VMD is 1.8.4
>
> Thank you
> 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078