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From: Ting Wang (wang_at_eml-r.villa-bosch.de)
Date: Tue Aug 09 2005 - 03:50:11 CDT

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Is it possible to output the secondary structure assignment of each
frame in a trajectory into a file so that we can calculate the number of
residues in alpha-helical or beta-strand conformations? I am using
sscache.txt to update secondary structure assignment.

Thanks in advance!

Ting

-- 
Dr. Ting Wang
Molecular & Cellular Modelling
EML Research gGmbH
Villa Bosch
Schloss-Wolfsbrunnenweg 31c
69118 Heidelberg
Germany
Tel: +49 6221 533 262
Fax: +49 6221 533 298
Email: ting.wang_at_eml-r.villa-bosch.de
Web:   http://www.embl-heidelberg.de/~twang

• Next message: Justin Gullingsrud: "Re: Atom renumbering in DCD file"
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• Reply: John Stone: "Re: output secondary structure assignment into a file"
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